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io.github.cyanheads/protein-mcp-server

io.github.cyanheads/protein-mcp-server·v1.0.3·Image, Video & Audio
Quality Score
72
/100

MCP Server for 3D protein structural data retrieval & analysis from RCSB PDB, PDBe, and UniProt.

§01  Install
Claude Desktop (claude_desktop_config.json)
{
  "mcpServers": {
    "protein-mcp-server": {
      "command": "npx",
      "args": [
        "-y",
        "protein-mcp-server"
      ],
      "env": {
        "MCP_LOG_LEVEL": "info",
        "MCP_HTTP_HOST": "127.0.0.1",
        "MCP_HTTP_PORT": "3010",
        "MCP_HTTP_ENDPOINT_PATH": "/mcp",
        "MCP_AUTH_MODE": "none"
      }
    }
  }
}
Cursor (.cursor/mcp.json)
{
  "mcpServers": {
    "protein-mcp-server": {
      "command": "npx",
      "args": [
        "-y",
        "protein-mcp-server"
      ],
      "env": {
        "MCP_LOG_LEVEL": "info",
        "MCP_HTTP_HOST": "127.0.0.1",
        "MCP_HTTP_PORT": "3010",
        "MCP_HTTP_ENDPOINT_PATH": "/mcp",
        "MCP_AUTH_MODE": "none"
      }
    }
  }
}
Cline (cline_mcp_settings.json)
npx -y protein-mcp-server
§02  Environment variables
MCP_LOG_LEVEL

Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').

MCP_HTTP_HOST

The hostname for the HTTP server.

MCP_HTTP_PORT

The port to run the HTTP server on.

MCP_HTTP_ENDPOINT_PATH

The endpoint path for the MCP server.

MCP_AUTH_MODE

Authentication mode to use: 'none', 'jwt', or 'oauth'.

MCP_LOG_LEVEL

Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').

§03  MCP Quality Score  ·  methodology
freshness
12
completeness
10
installability
25
documentation
15
stability
10
§04  Alternatives in Image, Video & Audio